Jatropha Genome Database

JcCA0304111.10 (JcS_103935.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0304111
Scaffold:
JcS_103935 JcCB0114361(+) =JcCA0304111(-) =JcCA0073501(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RF84_RICCO 546 82.0 87.0 (tr|B9RF84) Cyclin h, putative OS=Ricinus communis GN=RCOM_1432330 PE=3 SV=1
Arabidopsis_pep AT5G27620.1 409 65.3 78.9 | Symbols: CYCH;1 | CYCH;1 (CYCLIN H;1); cyclin-dependent protein kinase/ protein binding / protein kinase | chr5:9771762-9774684 FORWARD
soybean_pep Glyma06g17280.2 477 69.3 80.3  
Medicago_pep IMGA|Medtr1g099610.1 441 66.6 79.9 Cyclin-like; ; ; chr01_pseudomolecule_IMGAG_V3 20418778-20422282 E EGN_Mt090430 20090702
grape_pep GSVIVT01031086001 461 66.6 77.9  
castor_bean_cds 30128.m008799 733 88.7 88.7 cyclin h, putative
castor_bean_pep 30128.m008799 546 82.0 87.0 cyclin h, putative
JAT_13201ests gi|268523114|gb|FM894697.1|FM894697 613 100.0 100.0 FM894697 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000530, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0304111.10 length: 323 aa.
IPR006670 Cyclin
method AccNumber shortName E-value location
HMMSmart SM00385 no description 7.9e-07 78-156
IPR006671 Cyclin, N-terminal
HMMPfam PF00134 Cyclin_N 3.3e-09 92-162
IPR011028 Cyclin-like
superfamily SSF47954 Cyclin-like 3.1e-26 166-296
13-165
IPR013763 Cyclin-related
Gene3D G3DSA:1.10.472.10 no description 2.1e-45 3-189
IPR015429 Transcription regulator cyclin
HMMPanther PTHR10026 CYCLIN 8.9e-83 81-318
IPR015432 Cyclin H
HMMPanther PTHR10026:SF8 CYCLIN 8.9e-83 81-318
no_ID  
Seg seg seg NA 292-313