Jatropha Genome Database

JcCA0304071.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0304071
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RK12_RICCO 877 72.9 82.8 (tr|B9RK12) Potassium channel AKT6, putative OS=Ricinus communis GN=RCOM_1053900 PE=4 SV=1
Arabidopsis_pep AT2G25600.1 721 62.0 74.2 | Symbols: SPIK, AKT6 | SPIK (Shaker Pollen Inward K+ channel); cyclic nucleotide binding / inward rectifier potassium channel/ potassium channel | chr2:10894603-10898369 FORWARD
soybean_pep Glyma17g12740.1 726 62.2 72.9  
Medicago_pep IMGA|Medtr8g119290.1 713 61.8 74.8 Cyclic nucleotide-binding chr08_pseudomolecule_IMGAG_V3 27002951-26996130 E EGN_Mt090430 20090702
grape_pep GSVIVT01015479001 752 62.9 76.1  
castor_bean_cds 29912.m005585 783 85.3 85.3 Potassium channel AKT6, putative
castor_bean_pep 29912.m005585 877 72.9 82.8 Potassium channel AKT6, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0304071.10 length: 613 aa.
IPR000595 Cyclic nucleotide-binding
method AccNumber shortName E-value location
HMMPfam PF00027 cNMP_binding 2.4e-13 135-220
HMMSmart SM00100 no description 1.8e-18 119-232
ProfileScan PS50042 CNMP_BINDING_3 18.886 131-217
IPR002110 Ankyrin repeat
HMMPfam PF00023 Ank 9.1e-10 293-324
391-421
HMMSmart SM00248 no description 3.8e-06 260-289
293-322
326-355
356-386
390-419
ProfileScan PS50088 ANK_REPEAT 15.654 293-325
326-358
390-422
IPR014710 RmlC-like jelly roll fold
Gene3D G3DSA:2.60.120.10 no description 3.5e-18 86-248
IPR018490 Cyclic nucleotide-binding-like
superfamily SSF51206 cAMP-binding 5.2e-25 66-228
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 2.4e-44 265-445
ProfileScan PS50297 ANK_REP_REGION 41.407 265-439
superfamily SSF48403 Ankyrin 6.4e-52 229-463
IPR021789 Protein of unknown function DUF3354
HMMPfam PF11834 DUF3354 4e-26 542-606
no_ID  
FPrintScan PR01415 ANKYRIN 4.7e-05 294-306
403-415
HMMPanther PTHR10217 VOLTAGE 1.6e-241 19-609
HMMPanther PTHR10217:SF6 PLANT 1.6e-241 19-609