Jatropha Genome Database

JcCA0302931.10 (JcS_102081.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0302931
Scaffold:
JcS_102081 JcCB0021001(+) =JcCA0313541(+) =JcCA0302931(-) =JcCA0020521(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RM04_RICCO 637 77.8 82.9 (tr|B9RM04) Leucine zipper-ef-hand containing transmembrane protein, putative OS=Ricinus communis GN=RCOM_1076740 PE=4 SV=1
Arabidopsis_pep AT1G65540.1 453 59.3 70.0 | Symbols: | calcium-binding EF hand family protein | chr1:24362382-24366011 REVERSE
soybean_pep Glyma09g38300.1 485 62.0 70.8  
Medicago_pep IMGA|Medtr7g090240.1 498 63.1 71.8 LETM1-like chr07_pseudomolecule_IMGAG_V3 20081490-20075571 H EGN_Mt090430 20090702
grape_pep GSVIVT01038211001 498 63.5 72.8  
castor_bean_cds 29929.m004507 1082 89.4 89.4 leucine zipper-ef-hand containing transmembrane protein, putative
castor_bean_pep 29929.m004507 637 77.8 82.9 leucine zipper-ef-hand containing transmembrane protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0302931.10 length: 412 aa.
IPR011685 LETM1-like
method AccNumber shortName E-value location
HMMPfam PF07766 LETM1 1.8e-78 206-411
no_ID  
HMMPanther PTHR14009 LEUCINE 3e-120 185-412
HMMPanther PTHR14009:SF1 LEUCINE 3e-120 185-412
Seg seg seg NA 157-163
274-292