Jatropha Genome Database

JcCA0302361.30 (JcS_102606.90)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0302361
Scaffold:
JcS_102606 JcCB0075081(+) =JcCB0070851(+) =JcCA0302361(+) =JcCB0100311(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RF38_RICCO 311 69.0 75.9 (tr|B9RF38) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1431170 PE=4 SV=1
Arabidopsis_pep AT1G54850.1 227 60.1 77.7 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54840.1); Has 35 Blast hits to 35 proteins in 7 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:20454440-20455994 FORWARD
soybean_pep Glyma10g29680.1 199 57.3 77.1  
Medicago_pep IMGA|Medtr1g099290.1 204 56.4 72.9 HSP20-like chaperone chr01_pseudomolecule_IMGAG_V3 20268160-20264984 H EGN_Mt090430 20090702
grape_pep GSVIVT01000034001 214 60.6 78.8  
castor_bean_cds 30128.m008752 355 84.5 84.5 conserved hypothetical protein
castor_bean_pep 30128.m008752 311 69.0 75.9 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0302361.30 length: 198 aa.
IPR002068 Heat shock protein Hsp20
method AccNumber shortName E-value location
HMMPfam PF00011 HSP20 0.00016 100-193
ProfileScan PS01031 HSP20 11.932 99-197
IPR008978 HSP20-like chaperone
superfamily SSF49764 HSP20-like 6.7e-11 54-197