Jatropha Genome Database

JcCA0302271.10 (JcS_100024.140)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0302271
Scaffold:
JcS_100024 JcCA0019701(+) =JcCD0071482(-) =JcCD0058471(-) =JcCB0387971(+) =JcCB0022671(-) =JcCA0224481(+) =JcCA0302271(-) =JcCB0394631(+) =JcCA0299231(+) =JcCB0360521(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl D6BR49_9ROSI 98.2 77.8 77.8 (tr|D6BR49) Cytochrome c oxidase polypeptide Vc OS=Jatropha curcas PE=4 SV=1
Arabidopsis_pep AT5G61310.4 86.7 68.3 69.8 | Symbols: | cytochrome c oxidase subunit Vc, putative / COX5C, putative | chr5:24653543-24653737 REVERSE
soybean_pep Glyma03g37820.1 90.5 69.8 71.4  
Medicago_pep IMGA|Medtr1g106700.1 90.1 69.8 73.0 Cytochrome c oxidase subunit Vc chr01_pseudomolecule_IMGAG_V3 22329895-22331551 E EGN_Mt090430 20090702
grape_pep GSVIVT01031242001 84.0 65.1 71.4  
castor_bean_cds 29647.m002048 246 92.6 92.6 Cytochrome c oxidase polypeptide Vc, putative
castor_bean_pep 30076.m004656 94.0 73.0 76.2 Cytochrome c oxidase polypeptide Vc, putative
JAT_13201ests gi|237681001|gb|GO247637.1|GO247637 381 100.0 100.0 JcrME_RL1181 Expressed sequence tags from Jatropha curcas root cDNA library Jatropha curcas cDNA, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0302271.10 length: 63 aa.
IPR008432 Cytochrome c oxidase subunit Vc
method AccNumber shortName E-value location
Molecular Function GO:0004129 cytochrome-c oxidase activity    
Cellular Component GO:0005746 mitochondrial respiratory chain    
Biological Process GO:0055114 oxidation reduction    
BlastProDom PD019231 COX5C_ORYSA_Q9SXX7; 3e-18 2-63
HMMPIR PIRSF038131 Cytochrome 1.1e-42 1-63
HMMPfam PF05799 COX5C 8.1e-39 2-63
no_ID  
Seg seg seg NA 20-33