Jatropha Genome Database

JcCA0302221.20 (JcS_201332.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0302221
Scaffold:
JcS_201332 JcCA0302221(+) =JcCA0028681(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SX30_RICCO 267 81.1 88.8 (tr|B9SX30) Isopropylmalate synthase, putative OS=Ricinus communis GN=RCOM_1267040 PE=3 SV=1
Arabidopsis_pep AT1G74040.1 240 74.8 85.5 | Symbols: IMS1, MAML-3, IPMS2 | IMS1 (2-ISOPROPYLMALATE SYNTHASE 1); 2-isopropylmalate synthase | chr1:27842258-27845566 FORWARD
soybean_pep Glyma20g38950.3 224 71.9 80.6  
Medicago_pep IMGA|Medtr1g146810.1 219 73.3 84.0 Alpha-isopropylmalate/homocitrate synthase; chr01_pseudomolecule_IMGAG_V3 32578362-32586181 F EGN_Mt090430 20090702
grape_pep GSVIVT01013566001 223 70.6 86.3  
castor_bean_cds 30041.m000240 337 84.8 84.8 isopropylmalate synthase, putative
castor_bean_pep 30041.m000240 267 81.1 88.8 isopropylmalate synthase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c00616 991 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0302221.20 length: 169 aa.
IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
method AccNumber shortName E-value location
Molecular Function GO:0003852 2-isopropylmalate synthase activity    
Biological Process GO:0009098 leucine biosynthetic process    
HMMPfam PF08502 LeuA_dimer 2.1e-40 5-147
superfamily SSF110921 2-isopropylmalate 1.9e-17 20-147
no_ID  
HMMPanther PTHR10277 ISOPROPYLMALATE 6.7e-33 4-156
HMMPanther PTHR10277:SF9 ISOPROPYLMALATE 6.7e-33 4-156