Jatropha Genome Database

JcCA0301911.10 (JcS_102136.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0301911
Scaffold:
JcS_102136 JcCB0262451(+) =JcCA0301911(+) =JcCB0194531(-) =JcCB0389821(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9T4M6_RICCO 393 77.0 88.3 (tr|B9T4M6) Aspartate semialdehyde dehydrogenase, putative OS=Ricinus communis GN=RCOM_0053560 PE=4 SV=1
Arabidopsis_pep AT1G14820.3 327 65.4 77.9 | Symbols: | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | chr1:5105237-5106793 REVERSE
soybean_pep Glyma02g09460.1 344 65.7 83.7  
Medicago_pep IMGA|Medtr3g151400.1 190 42.5 62.7 Cellular retinaldehyde binding/alpha-tocopherol transport; Cellular retinaldehyde-binding/triple function, N-terminal chr03_pseudomolecule_IMGAG_V3 40138254-40135982 E EGN_Mt090430 20090702
grape_pep GSVIVT01011647001 374 73.6 86.4  
castor_bean_cds 27647.m000178 389 84.7 84.7 aspartate semialdehyde dehydrogenase, putative
castor_bean_pep 27647.m000178 393 77.0 88.3 aspartate semialdehyde dehydrogenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0301911.10 length: 240 aa.
IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal
method AccNumber shortName E-value location
Gene3D G3DSA:3.40.525.10 no description 8.5e-30 67-229
HMMPfam PF00650 CRAL_TRIO 2.1e-25 94-226
HMMSmart SM00516 no description 1e-26 73-229
ProfileScan PS50191 CRAL_TRIO 18.643 67-232
superfamily SSF52087 CRAL/TRIO 7.2e-34 69-229
IPR011074 Phosphatidylinositol transfer protein-like, N-terminal
superfamily SSF46938 CRAL/TRIO 3e-10 1-68
no_ID  
Gene3D G3DSA:1.10.8.20 no description 4.6e-09 1-59
HMMPanther PTHR10174 RETINALDEHYDE 7.4e-102 9-228
HMMPanther PTHR10174:SF2 ASPARTATE 7.4e-102 9-228