Jatropha Genome Database

JcCA0301341.20 (JcS_105665.20)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0301341
Scaffold:
JcS_105665 JcCB0897181(+) =JcCA0257091(+) =JcCA0301341(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9HV70_POPTR 76.3 44.6 65.1 (tr|B9HV70) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_881256 PE=4 SV=1
Arabidopsis_pep --No_Hits--        
soybean_pep Glyma13g29590.1 72.8 39.3 60.7  
Medicago_pep IMGA|Medtr3g073810.1 60.5 34.1 59.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V3 17197722-17195914 H EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds --No_Hits--        
castor_bean_pep 29970.m001031 62.8 45.0 60.0 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0301341.20 length: 105 aa.
IPR002156 Ribonuclease H
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004523 ribonuclease H activity    
ProfileScan PS50879 RNASE_H 8.953 1-83
IPR012337 Polynucleotidyl transferase, ribonuclease H fold
Molecular Function GO:0003676 nucleic acid binding    
superfamily SSF53098 Ribonuclease 2.8e-07 1-92
IPR015706 RNA-directed DNA polymerase (reverse transcriptase), related
HMMPanther PTHR19446 REVERSE 6.2e-06 1-90
no_ID  
HMMPanther PTHR19446:SF97 NON-LTR 6.2e-06 1-90