Jatropha Genome Database

JcCA0301151.10 (JcS_101772.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0301151
Scaffold:
JcS_101772 JcCA0301151(+) =JcCB0429541(+) =JcCB0088661(+) =JcCA0254141(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RXK7_RICCO 484 59.2 71.8 (tr|B9RXK7) Starch synthase, putative OS=Ricinus communis GN=RCOM_0904350 PE=3 SV=1
Arabidopsis_pep AT1G11720.1 306 41.7 56.6 | Symbols: ATSS3 | ATSS3 (starch synthase 3); starch synthase/ transferase, transferring glycosyl groups | chr1:3952511-3956840 FORWARD
soybean_pep Glyma13g27480.1 355 44.8 61.5  
Medicago_pep IMGA|Medtr4g089510.1 75.5 39.1 52.7 Pentatricopeptide repeat chr04_pseudomolecule_IMGAG_V3 18666066-18662138 E EGN_Mt090430 20090702
grape_pep GSVIVT01012723001 172 44.1 53.0  
castor_bean_cds 29842.m003588 468 89.9 89.9 starch synthase, putative
castor_bean_pep 29842.m003588 361 64.5 78.4 starch synthase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0301151.10 length: 423 aa.
IPR005085 Carbohydrate binding domain, family 25
method AccNumber shortName E-value location
HMMPfam PF03423 CBM_25 2.3e-11 184-269
360-411
no_ID  
Coil coil coiled-coil NA 42-63
139-167
282-332
Seg seg seg NA 281-323