Jatropha Genome Database

JcCA0298491.10 (JcS_102280.30)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0298491
Scaffold:
JcS_102280 JcCB0384191(+) =JcCB0537911(+) =JcCA0298491(-) =JcCB0430181(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9HN52_POPTR 1081 88.9 95.0 (tr|B9HN52) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_804343 PE=4 SV=1
Arabidopsis_pep AT1G64260.1 158 23.1 41.2 | Symbols: | zinc finger protein-related | chr1:23847756-23849915 FORWARD
soybean_pep Glyma03g40850.1 530 52.8 67.8  
Medicago_pep IMGA|Medtr7g143350.1 627 50.9 68.7 Plant MuDR transposase; Zinc finger, SWIM-type chr07_pseudomolecule_IMGAG_V3 34388341-34391833 E EGN_Mt090430 20090702
grape_pep GSVIVT01023989001 287 30.8 48.4  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0298491.10 length: 575 aa.
IPR004332 Transposase, MuDR, plant
method AccNumber shortName E-value location
HMMPfam PF03108 MuDR 3.8e-21 2-67
IPR006564 Zinc finger, PMZ-type
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00575 no description 3.3e-10 453-480
IPR007527 Zinc finger, SWIM-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF04434 SWIM 1.3e-10 443-477
ProfileScan PS50966 ZF_SWIM 10.633 437-478
IPR018289 MULE transposase, conserved domain
HMMPfam PF10551 MULE 1.7e-19 207-294