Jatropha Genome Database

JcCA0297821.20 (JcS_105541.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0297821
Scaffold:
JcS_105541 JcCB0772051(-) =JcCA0293541(-) =JcCA0297821(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl D7SL97_VITVI 148 92.1 96.1 (tr|D7SL97) Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025322001 PE=4 SV=1
Arabidopsis_pep AT3G20810.2 138 85.3 92.0 | Symbols: | transcription factor jumonji (jmjC) domain-containing protein | chr3:7275814-7278144 FORWARD
soybean_pep Glyma12g05890.1 130 88.2 94.7  
Medicago_pep IMGA|Medtr1g083710.1 50.1 42.3 56.4 Transcription factor jumonji, jmjC chr01_pseudomolecule_IMGAG_V3 16593604-16601881 E EGN_Mt090430 20090702
grape_pep GSVIVT01025322001 148 92.1 96.1  
castor_bean_cds 30169.m006397 153 87.6 87.6 transcription factor, putative
castor_bean_pep 30169.m006397 138 82.7 90.1 transcription factor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0297821.20 length: 93 aa.
IPR003347 Transcription factor jumonji/aspartyl beta-hydroxylase
method AccNumber shortName E-value location
ProfileScan PS51184 JMJC 19.385 1-93
no_ID  
HMMPanther PTHR12461 HYPOXIA-INDUCIBLE 1.6e-47 1-83
HMMPanther PTHR12461:SF3 UNCHARACTERIZED 1.6e-47 1-83
HMMPfam PF08007 Cupin_4 4.3e-09 33-82
Seg seg seg NA 77-93
superfamily SSF51197 Clavaminate 1.2e-28 1-84