Jatropha Genome Database

JcCA0297521.10 (JcS_107535.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0297521
Scaffold:
JcS_107535 JcCA0297521(+) =JcCB0746061(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S1S9_RICCO 453 69.2 74.9 (tr|B9S1S9) 9-cis-epoxycarotenoid dioxygenase, putative OS=Ricinus communis GN=RCOM_0867890 PE=4 SV=1
Arabidopsis_pep AT4G19170.1 348 69.7 79.4 | Symbols: NCED4 | NCED4 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4) | chr4:10481835-10483622 FORWARD
soybean_pep Glyma01g35910.1 362 76.7 83.3  
Medicago_pep IMGA|Medtr5g025290.1 364 59.1 71.1 Carotenoid oxygenase chr05_pseudomolecule_IMGAG_V3 10116366-10118405 E EGN_Mt090430 20090702
grape_pep GSVIVT01036862001 320 54.2 64.4  
castor_bean_cds 29827.m002661 367 82.7 82.7 9-cis-epoxycarotenoid dioxygenase, putative
castor_bean_pep 29827.m002661 453 69.2 74.9 9-cis-epoxycarotenoid dioxygenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0297521.10 length: 342 aa.
IPR004294 Carotenoid oxygenase
method AccNumber shortName E-value location
HMMPanther PTHR10543 CARTENOID 3.3e-78 106-342
HMMPfam PF03055 RPE65 5.3e-47 145-342
no_ID  
HMMPanther PTHR10543:SF1 9-CIS-EPOXYCAROTENOID 3.3e-78 106-342
Seg seg seg NA 20-24
75-97
239-253