Jatropha Genome Database

JcCA0296911.10 (JcS_107527.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0296911
Scaffold:
JcS_107527 JcCA0296911(+) =JcCB0032041(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B3SRP3_MANES 348 63.5 75.3 (tr|B3SRP3) Starch synthase isoform II OS=Manihot esculenta GN=SSII PE=2 SV=1
Arabidopsis_pep AT3G01180.1 160 39.0 50.0 | Symbols: AtSS2 | AtSS2 (starch synthase 2); transferase, transferring glycosyl groups | chr3:62456-65678 REVERSE
soybean_pep Glyma19g02690.1 185 42.1 54.6  
Medicago_pep IMGA|Medtr6g012910.1 148 40.8 52.5 Glycosyl transferase, group 1 chr06_pseudomolecule_IMGAG_V3 2547326-2554167 E EGN_Mt090430 20090702
grape_pep GSVIVT01011429001 208 42.6 55.1  
castor_bean_cds 28838.m000254 196 90.2 90.2 starch synthase, putative
castor_bean_pep 28838.m000254 325 63.3 73.1 starch synthase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c09623 105 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0296911.10 length: 296 aa.
IPR013534 Starch synthase, catalytic domain
method AccNumber shortName E-value location
HMMPfam PF08323 Glyco_transf_5 2.7e-14 259-296
no_ID  
HMMPanther PTHR12526 GLYCOSYLTRANSFERASE 1.7e-17 259-296
HMMPanther PTHR12526:SF17 STARCH 1.7e-17 259-296
Seg seg seg NA 104-110
superfamily SSF53756 UDP-Glycosyltransferase/glycogen 3.2e-10 258-296