Jatropha Genome Database

JcCA0296741.10 (JcS_100447.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0296741
Scaffold:
JcS_100447 JcCA0296741(-) =JcCB0115061(+) =JcCB0135511(+) =JcCA0307801(-) =JcCA0110991(+) =JcCB0044721(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A9P9T1_POPTR 216 88.6 91.1 (tr|A9P9T1) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_814531 PE=4 SV=1
Arabidopsis_pep AT2G36930.1 185 74.8 85.7 | Symbols: | zinc finger (C2H2 type) family protein | chr2:15510002-15511347 REVERSE
soybean_pep Glyma10g06240.1 207 82.0 87.7  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01033644001 204 82.0 87.7  
castor_bean_cds 30078.m002287 218 85.7 85.7 Bud site selection protein, putative
castor_bean_pep 30078.m002287 168 87.4 96.6 Bud site selection protein, putative
JAT_13201ests gi|218687028|gb|GH296412.1|GH296412 268 100.0 100.0 JCL862 Jatropha curcas total leaf library Jatropha curcas cDNA, mRNA sequence
KJC_r1 KJC_c03112 634 96.7 96.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0296741.10 length: 122 aa.
IPR003604 Zinc finger, U1-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00451 no description 2.8e-09 59-93
IPR007087 Zinc finger, C2H2-type
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 64-86
no_ID  
HMMPanther PTHR20863 ACYL 3.8e-42 10-122
HMMPanther PTHR20863:SF2 ZINC 3.8e-42 10-122
HMMPfam PF12171 zf-C2H2_jaz 5.4e-09 61-87