| JcS_100886 | JcCA0265561(-) =JcCA0296711(-) =JcCA0151401(+) =JcCA0285981(+) =JcCB0060901(+) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9SHZ2_RICCO | 531 | 83.6 | 92.2 | (tr|B9SHZ2) WD-repeat protein, putative OS=Ricinus communis GN=RCOM_0611550 PE=4 SV=1 |
| Arabidopsis_pep | AT4G21520.1 | 469 | 74.1 | 83.8 | | Symbols: | transducin family protein / WD-40 repeat family protein | chr4:11447514-11450377 REVERSE |
| soybean_pep | Glyma07g30960.1 | 427 | 69.6 | 83.6 | |
| Medicago_pep | IMGA|Medtr4g125120.1 | 209 | 78.0 | 90.7 | Cytochrome cd1-nitrite reductase-like, C-terminal haem d1, putative chr04_pseudomolecule_IMGAG_V3 29444563-29437786 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01003194001 | 486 | 77.5 | 88.9 | |
| castor_bean_cds | 29681.m001313 | 878 | 87.9 | 87.9 | WD-repeat protein, putative |
| castor_bean_pep | 29681.m001313 | 531 | 83.6 | 92.2 | WD-repeat protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCA0296711.20 | length: 312 aa. | |||
| IPR001680 | WD40 repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMSmart | SM00320 | no description | 4.3e-05 | 41-80 99-146 149-192 199-243 246-286 |
| IPR011046 | WD40 repeat-like-containing domain | |||
| superfamily | SSF50978 | WD40 | 7.2e-32 | 32-296 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | |||
| Gene3D | G3DSA:2.130.10.10 | no description | 5e-27 | 42-296 |
| IPR017986 | WD40-repeat-containing domain | |||
| ProfileScan | PS50294 | WD_REPEATS_REGION | 10.179 | 210-295 |
| IPR019781 | WD40 repeat, subgroup | |||
| HMMPfam | PF00400 | WD40 | 6.3e-05 | 53-80 113-146 211-238 248-286 |
| no_ID | ||||
| HMMPanther | PTHR13211 | UNCHARACTERIZED | 9.8e-94 | 3-298 |