Jatropha Genome Database

JcCA0296331.20 (JcS_100234.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0296331
Scaffold:
JcS_100234 JcCA0296331(-) =JcCB0468081(+) =JcCA0028701(-) =JcCB0733251(-) =JcCA0152411(+) =JcCB0577931(+) =JcCA0145031(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S124_RICCO 860 73.3 81.2 (tr|B9S124) Potassium channel KAT2, putative OS=Ricinus communis GN=RCOM_0632940 PE=4 SV=1
Arabidopsis_pep AT5G46240.1 568 52.7 64.3 | Symbols: KAT1 | KAT1 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 1); cyclic nucleotide binding / inward rectifier potassium channel | chr5:18743652-18746561 REVERSE
soybean_pep Glyma08g24960.1 633 58.1 67.2  
Medicago_pep IMGA|Medtr2g024740.1 642 57.4 70.8 Cyclic nucleotide-binding; Ion transport protein chr02_pseudomolecule_IMGAG_V3 6368358-6364043 E EGN_Mt090430 20090702
grape_pep GSVIVT01021445001 534 79.4 89.4  
castor_bean_cds 29693.m002020 829 85.4 85.4 Potassium channel KAT2, putative
castor_bean_pep 29693.m002020 860 73.3 81.2 Potassium channel KAT2, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0296331.20 length: 666 aa.
IPR000595 Cyclic nucleotide-binding
method AccNumber shortName E-value location
HMMPfam PF00027 cNMP_binding 3.1e-14 278-365
HMMSmart SM00100 no description 2.9e-26 258-375
ProfileScan PS50042 CNMP_BINDING_3 24.027 258-377
IPR002110 Ankyrin repeat
ProfileScan PS50088 ANK_REPEAT 8.523 468-492
IPR003938 Potassium channel, voltage-dependent, EAG/ELK/ERG
Molecular Function GO:0005249 voltage-gated potassium channel activity    
Biological Process GO:0006813 potassium ion transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR01463 EAGCHANLFMLY 2.6e-05 128-145
154-165
172-181
IPR013099 Ion transport 2
HMMPfam PF07885 Ion_trans_2 1.8e-12 96-180
IPR014710 RmlC-like jelly roll fold
Gene3D G3DSA:2.60.120.10 no description 8.7e-26 256-380
IPR018490 Cyclic nucleotide-binding-like
superfamily SSF51206 cAMP-binding 1.2e-47 184-380
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 0.00047 466-528
ProfileScan PS50297 ANK_REP_REGION 9.569 468-515
superfamily SSF48403 Ankyrin 9.7e-09 466-520
IPR021789 Protein of unknown function DUF3354
HMMPfam PF11834 DUF3354 4.7e-28 583-653
no_ID  
Gene3D G3DSA:1.10.287.70 no description 1.8e-08 72-190
HMMPanther PTHR10217 VOLTAGE 8.9e-250 2-656
HMMPanther PTHR10217:SF6 PLANT 8.9e-250 2-656
Seg seg seg NA 15-27
59-71
565-574
superfamily SSF81324 Voltage-gated 1.8e-29 58-226