Jatropha Genome Database

JcCA0294231.20  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0294231
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9T4B0_RICCO 414 77.8 82.3 (tr|B9T4B0) Isoamylase, putative OS=Ricinus communis GN=RCOM_0176490 PE=4 SV=1
Arabidopsis_pep AT1G03310.1 327 59.9 73.4 | Symbols: ATISA2, ISA2, DBE1, BE2 | isoamylase, putative / starch debranching enzyme, putative | chr1:813975-816623 FORWARD
soybean_pep Glyma19g33620.1 336 64.6 73.5  
Medicago_pep IMGA|Medtr3g150290.1 97.8 32.7 48.7 Glycoside hydrolase, catalytic core chr03_pseudomolecule_IMGAG_V3 39561825-39558471 E EGN_Mt090430 20090702
grape_pep GSVIVT01009087001 122 30.2 46.8  
castor_bean_cds 28153.m000287 442 86.6 86.6 isoamylase, putative
castor_bean_pep 28153.m000287 414 77.8 82.3 isoamylase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0294231.20 length: 259 aa.
IPR013781 Glycoside hydrolase, subgroup, catalytic core
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0043169 cation binding    
Gene3D G3DSA:3.20.20.80 no description 6.8e-10 4-143
IPR017853 Glycoside hydrolase, catalytic core
superfamily SSF51445 (Trans)glycosidases 2.2e-09 7-149
no_ID  
HMMPanther PTHR10357 AMYLASE 2.2e-34 7-252
HMMPanther PTHR10357:SF24 ISOAMYLASE 2.2e-34 7-252
superfamily SSF51011 Glycosyl 3.6e-24 147-255