Jatropha Genome Database

JcCA0293801.10 (JcS_105361.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0293801
Scaffold:
JcS_105361 JcCB0006821(+) =JcCB0425011(+) =JcCA0293801(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RAW5_RICCO 837 63.9 73.4 (tr|B9RAW5) Disease resistance protein RPP13, putative OS=Ricinus communis GN=RCOM_1509380 PE=4 SV=1
Arabidopsis_pep AT3G07040.1 158 27.7 45.5 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE
soybean_pep Glyma01g01400.1 211 31.1 50.2  
Medicago_pep IMGA|Medtr5g028060.1 218 31.8 50.0 NB-ARC chr05_pseudomolecule_IMGAG_V3 11516153-11519924 E EGN_Mt090430 20090702
grape_pep GSVIVT01032422001 303 50.9 64.5  
castor_bean_cds 30147.m013889 755 83.9 83.9 Disease resistance protein RPP13, putative
castor_bean_pep 30147.m013889 837 63.9 73.4 Disease resistance protein RPP13, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0293801.10 length: 650 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 1 345-363
IPR002182 NB-ARC
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006915 apoptosis    
HMMPfam PF00931 NB-ARC 5.6e-07 138-189
no_ID  
Gene3D G3DSA:3.80.10.10 no description 8.3e-08 289-454
460-596
HMMPanther PTHR23155 LEUCINE-RICH 3.4e-08 282-596
Seg seg seg NA 467-481
591-600
superfamily SSF52058 L 6.9e-38 202-596