Jatropha Genome Database

JcCA0293541.10 (JcS_105541.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0293541
Scaffold:
JcS_105541 JcCB0772051(-) =JcCA0293541(-) =JcCA0297821(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RI82_RICCO 503 75.5 82.7 (tr|B9RI82) Transcription factor, putative OS=Ricinus communis GN=RCOM_1576970 PE=4 SV=1
Arabidopsis_pep AT3G20810.1 405 61.2 71.7 | Symbols: | transcription factor jumonji (jmjC) domain-containing protein | chr3:7275814-7278144 FORWARD
soybean_pep Glyma12g05890.1 432 68.9 78.0  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01025322001 303 70.7 80.8  
castor_bean_cds 30169.m006397 385 84.4 84.4 transcription factor, putative
castor_bean_pep 30169.m006397 503 75.5 82.7 transcription factor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0293541.10 length: 317 aa.
IPR003347 Transcription factor jumonji/aspartyl beta-hydroxylase
method AccNumber shortName E-value location
ProfileScan PS51184 JMJC 12.067 246-317
no_ID  
HMMPanther PTHR12461 HYPOXIA-INDUCIBLE 3.7e-77 48-317
HMMPanther PTHR12461:SF3 UNCHARACTERIZED 3.7e-77 48-317
Seg seg seg NA 48-57
103-112
superfamily SSF51197 Clavaminate 5.7e-36 144-317