Jatropha Genome Database

JcCA0293441.10 (JcS_100015.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0293441
Scaffold:
JcS_100015 JcCB0254931(+) =JcCA0293441(+) =JcCB0308731(-) =JcCA0309051(+) =JcCB0987371(-) =JcCB0356581(-) =JcCB0647611(-) =JcCA0314681(+) =JcCB0063711(+) =JcCB0588921(+) =JcCB0256761(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SEQ3_RICCO 111 89.8 93.2 (tr|B9SEQ3) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0222390 PE=4 SV=1
Arabidopsis_pep AT2G34160.1 99.4 79.7 88.1 | Symbols: | nucleic acid binding | chr2:14426283-14427220 FORWARD
soybean_pep Glyma13g44090.1 103 83.1 88.1  
Medicago_pep IMGA|Medtr2g126150.1 91.3 80.6 83.9 Alba, DNA/RNA-binding protein chr02_pseudomolecule_IMGAG_V3 30499152-30501662 E EGN_Mt090430 20090702
grape_pep GSVIVT01017289001 108 88.1 91.5  
castor_bean_cds 28320.m001111 159 90.6 90.6 conserved hypothetical protein
castor_bean_pep 28320.m001111 111 89.8 93.2 conserved hypothetical protein
JAT_13201ests gi|268524358|gb|FM895038.1|FM895038 83.8 100.0 100.0 FM895038 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001380, mRNA sequence
KJC_r1 KJC_c10136 204 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0293441.10 length: 68 aa.
IPR002775 Alba, DNA/RNA-binding protein
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF01918 Alba 9.5e-05 22-61
no_ID  
Gene3D G3DSA:3.30.110.20 no description 2.5e-11 20-59
superfamily SSF82704 AlbA-like 1.7e-08 20-61