Jatropha Genome Database

JcCA0292601.20 (JcS_100817.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0292601
Scaffold:
JcS_100817 JcCA0175521(-) =JcCB0433201(-) =JcCA0241471(-) =JcCA0292601(+) =JcCA0003732(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SD76_RICCO 579 70.8 77.0 (tr|B9SD76) Transcription factor, putative OS=Ricinus communis GN=RCOM_1163180 PE=4 SV=1
Arabidopsis_pep AT4G32010.1 312 46.6 57.3 | Symbols: HSL1, HSI2-L1, VAL2 | HSL1 (HSI2-LIKE 1); transcription factor | chr4:15481231-15484897 FORWARD
soybean_pep Glyma18g05840.1 385 53.6 66.0  
Medicago_pep IMGA|Medtr4g036540.1 381 52.0 63.5 Transcriptional factor B3; Zinc finger, CW-type chr04_pseudomolecule_IMGAG_V3 8953556-8945623 E EGN_Mt090430 20090702
grape_pep GSVIVT01030182001 411 54.5 67.7  
castor_bean_cds 29976.m000497 708 83.5 83.5 transcription factor, putative
castor_bean_pep 29976.m000497 579 70.8 77.0 transcription factor, putative
JAT_13201ests gi|268524794|gb|FM895492.1|FM895492 416 100.0 100.0 FM895492 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002423, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0292601.20 length: 402 aa.
IPR003340 Transcriptional factor B3
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 2.5e-14 321-402
ProfileScan PS50863 B3 10.264 321-402
no_ID  
Gene3D G3DSA:2.40.330.10 no description 4.2e-26 314-402
Seg seg seg NA 177-196