Jatropha Genome Database

JcCA0291961.20 (JcS_101855.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0291961
Scaffold:
JcS_101855 JcCA0071111(-) =JcCB0138981(-) =JcCA0274731(+) =JcCA0291961(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SQS9_RICCO 508 57.3 66.6 (tr|B9SQS9) O-linked n-acetylglucosamine transferase, ogt, putative OS=Ricinus communis GN=RCOM_1217350 PE=4 SV=1
Arabidopsis_pep AT1G04530.1 140 31.2 46.3 | Symbols: | binding | chr1:1234456-1235895 REVERSE
soybean_pep Glyma20g34190.1 298 46.2 61.6  
Medicago_pep IMGA|Medtr1g087320.1 265 40.7 55.8 Tetratricopeptide-like helical chr01_pseudomolecule_IMGAG_V3 17571774-17568474 E EGN_Mt090430 20090702
grape_pep GSVIVT01027919001 368 46.8 59.7  
castor_bean_cds 30008.m000801 406 83.9 83.9 o-linked n-acetylglucosamine transferase, ogt, putative
castor_bean_pep 30008.m000801 508 57.3 66.6 o-linked n-acetylglucosamine transferase, ogt, putative
JAT_13201ests gi|237680304|gb|GO246488.1|GO246488 50.1 91.9 91.9 JcrME_RL0032 Expressed sequence tags from Jatropha curcas root cDNA library Jatropha curcas cDNA, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0291961.20 length: 469 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005488 binding    
Gene3D G3DSA:1.25.40.10 no description 6e-18 210-467
IPR013026 Tetratricopeptide repeat-containing
ProfileScan PS50293 TPR_REGION 14.179 228-296
374-469
no_ID  
HMMPanther PTHR23083 TETRATRICOPEPTIDE 1.9e-13 214-463
HMMPanther PTHR23083:SF23 O-GLCNAC 1.9e-13 214-463
Seg seg seg NA 148-157
183-201
309-318
superfamily SSF48452 TPR-like 1.1e-22 214-458