Jatropha Genome Database

JcCA0289691.10 (JcS_100275.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0289691
Scaffold:
JcS_100275 JcCB0163891(-) =JcCA0289691(+) =JcCA0254131(-) =JcCB0372411(-) =JcCB0588301(-) =JcCB0224421(+) =JcCB0695521(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RZ79_RICCO 365 72.3 81.2 (tr|B9RZ79) DNA mismatch repair protein muts2, putative OS=Ricinus communis GN=RCOM_0936040 PE=3 SV=1
Arabidopsis_pep AT1G65070.1 104 39.0 58.5 | Symbols: | DNA mismatch repair MutS family protein | chr1:24173132-24176244 REVERSE
soybean_pep Glyma07g31550.1 268 53.5 70.5  
Medicago_pep IMGA|AC233659_24.1 256 52.3 67.6 MutS 2 protein AC233659.1 104034-100163 E EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds 29851.m002400 617 87.6 87.6 DNA mismatch repair protein muts2, putative
castor_bean_pep 29851.m002400 365 72.3 81.2 DNA mismatch repair protein muts2, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c02900 1312 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0289691.10 length: 450 aa.
IPR002625 Smr protein/MutS2 C-terminal
method AccNumber shortName E-value location
HMMPfam PF01713 Smr 3.8e-06 379-449
HMMSmart SM00463 no description 1.2e-07 376-450
ProfileScan PS50828 SMR 13.996 379-450
no_ID  
Seg seg seg NA 1-13
139-160
216-229