Jatropha Genome Database

JcCA0289141.10 (JcS_100339.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0289141
Scaffold:
JcS_100339 JcCB0069121(-) =JcCB0211371(+) =JcCB0086551(+) =JcCA0289141(+) =JcCB0056181(-) =JcCB0237221(-) =JcCB0031871(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RP36_RICCO 725 77.8 81.0 (tr|B9RP36) Clathrin assembly protein, putative OS=Ricinus communis GN=RCOM_0923910 PE=4 SV=1
Arabidopsis_pep AT2G25430.1 644 69.1 76.3 | Symbols: | epsin N-terminal homology (ENTH) domain-containing protein | chr2:10822716-10824677 FORWARD
soybean_pep Glyma06g07140.1 657 72.0 78.0  
Medicago_pep IMGA|Medtr3g137180.1 601 69.2 76.3 ENTH/VHS; ANTH; chr03_pseudomolecule_IMGAG_V3 34744737-34747022 E EGN_Mt090430 20090702
grape_pep GSVIVT01030504001 293 42.1 61.0  
castor_bean_cds 29848.m004618 607 86.0 86.0 clathrin assembly protein, putative
castor_bean_pep 29848.m004618 725 77.8 81.0 clathrin assembly protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c01669 1578 98.9 98.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0289141.10 length: 477 aa.
IPR008942 ENTH/VHS
method AccNumber shortName E-value location
Gene3D G3DSA:1.25.40.90 no description 5.8e-32 29-157
superfamily SSF48464 ENTH/VHS 1.4e-32 29-151
IPR011417 ANTH
Molecular Function GO:0005543 phospholipid binding    
HMMPfam PF07651 ANTH 2.1e-40 31-153
250-382
IPR013809 Epsin-like, N-terminal
HMMSmart SM00273 no description 3.4e-46 30-163
ProfileScan PS50942 ENTH 33.693 24-160
IPR014712 Clathrin adaptor, phosphoinositide-binding, GAT-like
Molecular Function GO:0005545 phosphatidylinositol binding    
Cellular Component GO:0030118 clathrin coat    
Molecular Function GO:0030276 clathrin binding    
Biological Process GO:0048268 clathrin coat assembly    
Gene3D G3DSA:1.20.58.150 no description 8.4e-36 257-387
no_ID  
HMMPanther PTHR22951 CLATHRIN 4e-172 28-475
HMMPanther PTHR22951:SF1 CLATHRIN 4e-172 28-475
Seg seg seg NA 234-250
394-407
416-437
superfamily SSF89009 GAT-like 1.6e-42 247-379