Jatropha Genome Database

JcCA0287971.10 (JcS_100039.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0287971
Scaffold:
JcS_100039 JcCB0487041(+) =JcCB0776371(-) =JcCD0163958(+) =JcCA0241461(-) =JcCB1001131(-) =JcCB0642181(+) =JcCA0292971(+) =JcCA0287971(+) =JcCB0076151(-) =JcCB0104751(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5BR24_VITVI 225 77.0 79.1 (tr|A5BR24) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026042 PE=4 SV=1
Arabidopsis_pep AT4G29160.3 224 59.3 62.7 | Symbols: SNF7.1 | SNF7.1 | chr4:14381019-14382342 FORWARD
soybean_pep Glyma08g03510.2 220 57.6 60.6  
Medicago_pep IMGA|Medtr4g160490.1 171 59.5 68.2 Snf7 chr04_pseudomolecule_IMGAG_V3 40687548-40682851 E EGN_Mt090430 20090702
grape_pep GSVIVT01035334001 225 77.0 79.1  
castor_bean_cds 29912.m005421 692 88.3 88.3 Charged multivesicular body protein 4b, putative
castor_bean_pep 29912.m005421 211 61.6 63.1 Charged multivesicular body protein 4b, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c06251 938 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0287971.10 length: 218 aa.
IPR005024 Snf7
method AccNumber shortName E-value location
Biological Process GO:0015031 protein transport    
HMMPfam PF03357 Snf7 2.4e-44 20-185
no_ID  
Coil coil coiled-coil NA 12-40
122-143
151-176
HMMPanther PTHR22761 SNF7 1.5e-24 64-176
Seg seg seg NA 21-49
149-175
176-190
204-218