Jatropha Genome Database

JcCA0287841.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0287841
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9I5I1_POPTR 467 62.6 76.7 (tr|B9I5I1) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_243072 PE=4 SV=1
Arabidopsis_pep AT5G23960.1 311 43.3 63.2 | Symbols: ATTPS21, TPS21 | TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene synthase/ alpha-humulene synthase | chr5:8092969-8095128 FORWARD
soybean_pep Glyma12g16990.1 316 44.7 65.6  
Medicago_pep IMGA|Medtr5g081360.1 327 47.3 66.6 Terpene synthase-like; Terpenoid synthase chr05_pseudomolecule_IMGAG_V3 30559952-30563990 E EGN_Mt090430 20090702
grape_pep GSVIVT01014569001 360 50.8 68.9  
castor_bean_cds 30169.m006314 71.9 81.6 81.6 Casbene synthase, chloroplast precursor, putative
castor_bean_pep 30169.m006314 446 57.4 77.1 Casbene synthase, chloroplast precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0287841.10 length: 408 aa.
IPR001906 Terpene synthase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF01397 Terpene_synth 4.4e-59 33-198
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 2.4e-58 228-404
IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 7.7e-66 21-223
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 4.4e-75 202-404
superfamily SSF48576 Terpenoid 3.8e-73 224-404
no_ID  
Coil coil coiled-coil NA 29-49
50-57