Jatropha Genome Database

JcCA0286951.10 (JcS_100797.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0286951
Scaffold:
JcS_100797 JcCA0136721(-) =JcCB0153301(-) =JcCB0314321(+) =JcCA0286951(-) =JcCB0158891(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RR61_RICCO 341 89.1 89.7 (tr|B9RR61) Auxin response factor, putative OS=Ricinus communis GN=RCOM_0710450 PE=4 SV=1
Arabidopsis_pep AT1G19220.1 310 79.9 86.4 | Symbols: ARF19, IAA22, ARF11 | ARF19 (AUXIN RESPONSE FACTOR 19); DNA binding / transcription factor | chr1:6628395-6632779 REVERSE
soybean_pep Glyma15g19980.1 321 82.6 87.5  
Medicago_pep IMGA|Medtr8g132840.1 319 82.6 86.4 Transcriptional factor B3; Auxin response factor; Aux/IAA_ARF_dimerisation chr08_pseudomolecule_IMGAG_V3 31477595-31471354 E EGN_Mt090430 20090702
grape_pep GSVIVT01015035001 328 85.3 88.6  
castor_bean_cds 29739.m003713 672 90.2 90.2 Auxin response factor, putative
castor_bean_pep 29739.m003713 341 89.1 89.7 Auxin response factor, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04538 664 97.3 97.3  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0286951.10 length: 196 aa.
IPR003340 Transcriptional factor B3
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 7.8e-08 123-178
no_ID  
Gene3D G3DSA:2.40.330.10 no description 2.1e-19 110-181
Seg seg seg NA 30-43