Jatropha Genome Database

JcCA0286251.20 (JcS_201776.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0286251
Scaffold:
JcS_201776 JcCB0186801(+) =JcCA0286251(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RKK7_RICCO 261 78.0 82.3 (tr|B9RKK7) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1050740 PE=4 SV=1
Arabidopsis_pep AT4G28910.3 166 66.4 74.6 | Symbols: | LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G07250.1); Has 223 Blast hits to 204 proteins in 56 species: Archae - 2; Bacteria - 11; Metazoa - 48; Fungi - 32; Plants - 89; Viruses - 3; Other Eukaryotes - 38 (source: NCBI BLink). | chr4:14264330-14265680 REVERSE
soybean_pep Glyma09g32660.3 215 64.6 75.0  
Medicago_pep IMGA|Medtr6g098770.1 194 63.5 72.4 Protein of unknown function DUF1675 chr06_pseudomolecule_IMGAG_V3 21475186-21471561 F EGN_Mt090430 20090702
grape_pep GSVIVT01015335001 219 65.9 78.7  
castor_bean_cds 29912.m005468 424 85.5 85.5 conserved hypothetical protein
castor_bean_pep 29912.m005468 261 78.0 82.3 conserved hypothetical protein
JAT_13201ests gi|262091087|gb|GT228514.1|GT228514 733 100.0 100.0 JC079 Jatropha seeds from fruits at three stages of maturation Jatropha curcas cDNA clone Contig80 5', mRNA sequence
KJC_r1 KJC_c05343 406 99.5 99.5  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0286251.20 length: 160 aa.
IPR012463 Protein of unknown function DUF1675
method AccNumber shortName E-value location
HMMPfam PF07897 DUF1675 6.5e-20 85-133
no_ID  
Seg seg seg NA 133-142