Jatropha Genome Database

JcCA0281201.10 (JcS_104803.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0281201
Scaffold:
JcS_104803 JcCB0426111(-) =JcCA0281201(-) =JcPR03EWSJF(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RN72_RICCO 524 78.2 86.9 (tr|B9RN72) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1344230 PE=4 SV=1
Arabidopsis_pep AT4G01880.1 449 67.4 76.9 | Symbols: | methyltransferase | chr4:810810-812882 REVERSE
soybean_pep Glyma07g26240.1 442 64.6 75.1  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01028196001 481 71.2 81.6  
castor_bean_cds 30076.m004583 325 85.6 85.6 conserved hypothetical protein
castor_bean_pep 30076.m004583 524 78.2 86.9 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0281201.10 length: 374 aa.
IPR021721 Zinc finger, CCCH-type, TRM13
method AccNumber shortName E-value location
HMMPfam PF11722 zf-TRM13_CCCH 2.6e-11 36-64
no_ID  
Coil coil coiled-coil NA 266-287
HMMPanther PTHR12998 UNCHARACTERIZED 6.3e-26 26-352
HMMPfam PF05206 TRM13 1.7e-50 188-355
HMMPfam PF05253 zf-U11-48K 4.6e-08 71-95