Jatropha Genome Database

JcCA0276311.10 (JcS_100218.70)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0276311
Scaffold:
JcS_100218 JcCA0234331(-) =JcCB0701471(-) =JcCA0278721(-) =JcCD0171023(+) =JcCA0154181(-) =JcCA0276311(+) =JcCB0448381(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SI18_RICCO 220 67.9 76.3 (tr|B9SI18) ATP-binding cassette transporter, putative OS=Ricinus communis GN=RCOM_0612210 PE=4 SV=1
Arabidopsis_pep AT2G29940.1 197 60.3 71.8 | Symbols: PDR3, ATPDR3 | PDR3 (PLEIOTROPIC DRUG RESISTANCE 3); ATPase, coupled to transmembrane movement of substances | chr2:12760139-12766455 FORWARD
soybean_pep Glyma18g07080.1 180 56.0 71.3  
Medicago_pep IMGA|Medtr1g013160.1 154 50.7 64.5 Glycoside hydrolase, family 10; AAA ATPase; chr01_pseudomolecule_IMGAG_V3 2297943-2287404 E EGN_Mt090430 20090702
grape_pep GSVIVT01024743001 204 63.1 72.6  
castor_bean_cds 29681.m001339 357 86.5 86.5 ATP-binding cassette transporter, putative
castor_bean_pep 29681.m001339 220 67.9 76.3 ATP-binding cassette transporter, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0276311.10 length: 163 aa.
IPR003959 ATPase, AAA-type, core
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 0.00016 79-133
no_ID  
Gene3D G3DSA:3.40.50.300 no description 6.2e-09 12-148
HMMPanther PTHR19241 ATP-BINDING 1.9e-26 63-148
HMMPanther PTHR19241:SF20 ATP-BINDING 1.9e-26 63-148
Seg seg seg NA 85-101
superfamily SSF52540 P-loop 1e-17 16-148