Jatropha Genome Database

JcCA0275141.10 (JcS_111708.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0275141
Scaffold:
JcS_111708 JcCB0083591(-) =JcCA0275141(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RC55_RICCO 353 94.9 98.9 (tr|B9RC55) Replication factor C / DNA polymerase III gamma-tau subunit, putative OS=Ricinus communis GN=RCOM_1685440 PE=4 SV=1
Arabidopsis_pep AT1G63160.1 341 92.1 97.2 | Symbols: | replication factor C 40 kDa, putative | chr1:23422068-23423771 REVERSE
soybean_pep Glyma17g13990.1 342 92.2 97.8  
Medicago_pep IMGA|Medtr3g100710.1 185 50.3 66.1 AAA ATPase, central region chr03_pseudomolecule_IMGAG_V3 24169522-24164910 E EGN_Mt090430 20090702
grape_pep GSVIVT01019825001 348 93.8 97.2  
castor_bean_cds 30190.m011152 591 89.6 89.6 replication factor C / DNA polymerase III gamma-tau subunit, putative
castor_bean_pep 30190.m011152 353 94.9 98.9 replication factor C / DNA polymerase III gamma-tau subunit, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0275141.10 length: 197 aa.
IPR003593 ATPase, AAA+ type, core
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 no description 3e-11 49-175
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 1.3e-14 53-170
no_ID  
Gene3D G3DSA:3.40.50.300 no description 7e-54 16-174
HMMPanther PTHR11669 REPLICATION 1.4e-33 90-192
Seg seg seg NA 2-14
superfamily SSF52540 P-loop 9.2e-47 28-183