Jatropha Genome Database

JcCA0273941.10 (JcS_202306.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0273941
Scaffold:
JcS_202306 JcCB0065971(+) =JcCA0273941(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl C6SW38_SOYBN 318 91.9 95.7 (tr|C6SW38) Putative uncharacterized protein OS=Glycine max PE=2 SV=1
Arabidopsis_pep AT5G18110.1 267 78.6 86.8 | Symbols: NCBP | NCBP (NOVEL CAP-BINDING PROTEIN); RNA binding / translation initiation factor | chr5:5989105-5990588 REVERSE
soybean_pep Glyma16g27010.2 326 89.5 94.2  
Medicago_pep IMGA|Medtr6g031030.1 297 91.5 94.8 Eukaryotic translation initiation factor 4E (eIF-4E) chr06_pseudomolecule_IMGAG_V3 7020634-7025387 E EGN_Mt090430 20090702
grape_pep GSVIVT01033412001 316 95.5 98.1  
castor_bean_cds 29950.m001122 577 90.4 90.4 eukaryotic translation initiation factor 4e type, putative
castor_bean_pep 29950.m001122 317 90.9 94.5 eukaryotic translation initiation factor 4e type, putative
JAT_13201ests gi|268522021|gb|FM892861.1|FM892861 622 100.0 100.0 FM892861 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003531, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0273941.10 length: 191 aa.
IPR001040 Eukaryotic translation initiation factor 4E (eIF-4E)
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003743 translation initiation factor activity    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006413 translational initiation    
Gene3D G3DSA:3.30.760.10 no description 3.4e-50 9-182
HMMPanther PTHR11960 EUKARYOTIC 5e-62 35-179
HMMPfam PF01652 IF4E 2.7e-50 46-184
superfamily SSF55418 Translation 3.7e-53 9-179
IPR019770 Eukaryotic translation initiation factor 4E (eIF-4E), conserved site
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003743 translation initiation factor activity    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006413 translational initiation    
PatternScan PS00813 IF4E NA 102-125
no_ID  
Seg seg seg NA 2-15