Jatropha Genome Database

JcCA0273631.30 (JcS_102931.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0273631
Scaffold:
JcS_102931 JcCA0124671(+) =JcCA0221041(+) =JcCA0273631(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5B5M0_VITVI 110 97.9 100.0 (tr|A5B5M0) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002826 PE=4 SV=1
Arabidopsis_pep AT5G66730.1 108 97.9 100.0 | Symbols: | zinc finger (C2H2 type) family protein | chr5:26641914-26643883 REVERSE
soybean_pep Glyma01g38290.1 108 97.9 100.0  
Medicago_pep IMGA|Medtr1g079070.1 105 95.8 100.0 Zinc finger, C2H2-type chr01_pseudomolecule_IMGAG_V3 15759586-15762413 E EGN_Mt090430 20090702
grape_pep GSVIVT01019000001 109 97.9 100.0  
castor_bean_cds 28694.m000662 234 95.2 95.2 nucleic acid binding protein, putative
castor_bean_pep 30170.m014220 106 95.8 100.0 nucleic acid binding protein, putative
JAT_13201ests gi|268522602|gb|FM896643.1|FM896643 109 89.7 89.7 FM896643 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003913, mRNA sequence
KJC_r1 KJC_c02448 127 91.7 91.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0273631.30 length: 66 aa.
IPR007087 Zinc finger, C2H2-type
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 22-42
ProfileScan PS50157 ZINC_FINGER_C2H2_2 10.949 20-42
no_ID  
HMMPanther PTHR19818 ZINC 0.00059 20-42
HMMPanther PTHR19818:SF16 gb 0.00059 20-42
HMMPfam PF12171 zf-C2H2_jaz 2.9e-06 19-42