Jatropha Genome Database

JcCA0273631.20 (JcS_102931.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0273631
Scaffold:
JcS_102931 JcCA0124671(+) =JcCA0221041(+) =JcCA0273631(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SGN1_RICCO 166 74.3 86.1 (tr|B9SGN1) LOB, putative OS=Ricinus communis GN=RCOM_0554390 PE=4 SV=1
Arabidopsis_pep AT1G06280.1 152 73.1 84.9 | Symbols: LBD2 | LBD2 (LOB DOMAIN-CONTAINING PROTEIN 2) | chr1:1920327-1920947 REVERSE
soybean_pep Glyma12g14100.1 146 71.1 83.3  
Medicago_pep IMGA|Medtr4g109260.1 143 59.4 71.7 Protein of unknown function DUF260 chr04_pseudomolecule_IMGAG_V3 24407417-24411519 E EGN_Mt090430 20090702
grape_pep GSVIVT01018486001 95.5 47.1 69.0  
castor_bean_cds 29646.m001112 103 81.1 81.1 LOB, putative
castor_bean_pep 29646.m001112 166 74.3 86.1 LOB, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0273631.20 length: 236 aa.
IPR004883 Lateral organ boundaries, LOB
method AccNumber shortName E-value location
HMMPfam PF03195 DUF260 3.5e-34 19-117
ProfileScan PS50891 LOB 23.650 18-119
no_ID  
Coil coil coiled-coil NA 98-119
Seg seg seg NA 5-10
110-125
133-167
192-201