Jatropha Genome Database

JcCA0272091.10 (JcS_103361.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0272091
Scaffold:
JcS_103361 JcCA0272091(+) =JcCB0122531(-) =JcCB0342561(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SHT8_RICCO 631 78.6 88.8 (tr|B9SHT8) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0621450 PE=4 SV=1
Arabidopsis_pep AT2G26920.1 285 43.6 60.3 | Symbols: | ubiquitin-associated (UBA)/TS-N domain-containing protein | chr2:11489648-11491588 FORWARD
soybean_pep Glyma13g04140.1 434 56.6 69.5  
Medicago_pep IMGA|Medtr5g095840.1 397 53.4 65.8 UBA-like chr05_pseudomolecule_IMGAG_V3 38029706-38024797 E EGN_Mt090430 20090702
grape_pep GSVIVT01037380001 364 52.0 62.4  
castor_bean_cds 29686.m000873 662 85.3 85.3 conserved hypothetical protein
castor_bean_pep 29686.m000873 631 78.6 88.8 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c03843 1189 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0272091.10 length: 423 aa.
IPR000449 Ubiquitin-associated/translation elongation factor EF1B, N-terminal
method AccNumber shortName E-value location
HMMPfam PF00627 UBA 3.3e-06 168-198
IPR009060 UBA-like
superfamily SSF46934 UBA-like 4.2e-08 156-204
IPR015940 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
HMMSmart SM00165 no description 0.0015 163-200
ProfileScan PS50030 UBA 10.691 149-201
no_ID  
Coil coil coiled-coil NA 123-154
Gene3D G3DSA:1.10.8.30 no description 0.00015 168-207
Seg seg seg NA 2-21