Jatropha Genome Database

JcCA0271581.10 (JcS_102554.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0271581
Scaffold:
JcS_102554 JcCB0691491(+) =JcCB0400041(+) =JcCB0340941(+) =JcCA0271581(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SFB7_RICCO 471 90.7 96.4 (tr|B9SFB7) TRANSPORT INHIBITOR RESPONSE 1 protein, putative OS=Ricinus communis GN=RCOM_1095990 PE=4 SV=1
Arabidopsis_pep AT3G62980.1 274 55.6 70.2 | Symbols: TIR1 | TIR1 (TRANSPORT INHIBITOR RESPONSE 1); auxin binding / protein binding / ubiquitin-protein ligase | chr3:23273479-23276181 REVERSE
soybean_pep Glyma07g30910.2 416 79.0 90.7  
Medicago_pep IMGA|Medtr4g124940.1 405 77.4 88.3 Cyclin-like F-box chr04_pseudomolecule_IMGAG_V3 29352485-29348732 F EGN_Mt090430 20090702
grape_pep GSVIVT01003183001 352 69.8 79.0  
castor_bean_cds 29933.m001427 803 88.6 88.6 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
castor_bean_pep 29933.m001427 471 90.7 96.4 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0271581.10 length: 250 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.80.10.10 no description 2.2e-10 103-250
HMMPanther PTHR23125 F-BOX/LEUCINE 1.1e-82 3-250
HMMPanther PTHR23125:SF17 GRR1-RELATED, 1.1e-82 3-250
superfamily SSF52047 RNI-like 1.3e-16 1-250