Jatropha Genome Database

JcCA0270781.10 (JcS_107238.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0270781
Scaffold:
JcS_107238 JcCA0270781(+) =JcCB0545331(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q9AXN7_THLFG 756 73.3 85.7 (tr|Q9AXN7) Tyrosine/dopa decarboxylase OS=Thalictrum flavum subsp. glaucum GN=TYDC1 PE=2 SV=1
Arabidopsis_pep AT2G20340.1 595 58.1 75.2 | Symbols: | tyrosine decarboxylase, putative | chr2:8779804-8782490 FORWARD
soybean_pep Glyma09g02530.1 709 72.3 84.3  
Medicago_pep IMGA|Medtr7g064800.1 696 67.6 83.0 Pyridoxal-dependent decarboxylase; ; chr07_pseudomolecule_IMGAG_V3 13168638-13170280 E EGN_Mt090430 20090702
grape_pep GSVIVT01028441001 614 59.5 76.9  
castor_bean_cds 60499.m000013 58.0 84.9 84.9 aromatic amino acid decarboxylase, putative
castor_bean_pep 29637.m000726 612 59.7 76.8 aromatic amino acid decarboxylase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0270781.10 length: 478 aa.
IPR002129 Pyridoxal phosphate-dependent decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0016831 carboxy-lyase activity    
Biological Process GO:0019752 carboxylic acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11999 GROUP 6.3e-113 198-476
HMMPfam PF00282 Pyridoxal_deC 1.2e-151 21-394
IPR010977 Aromatic-L-amino-acid decarboxylase
Biological Process GO:0006519 cellular amino acid and derivative metabolic process    
Molecular Function GO:0016831 carboxy-lyase activity    
FPrintScan PR00800 YHDCRBOXLASE 8e-71 15-32
33-52
59-78
80-98
99-118
124-144
333-348
376-395
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 5.8e-93 68-360
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 2.5e-31 361-477
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 1.1e-140 1-476
IPR021115 Pyridoxal-phosphate binding site
PatternScan PS00392 DDC_GAD_HDC_YDC NA 277-298
no_ID  
Gene3D G3DSA:1.20.1340.10 no description 1.9e-23 1-67
HMMPanther PTHR11999:SF11 AROMATIC 6.3e-113 198-476