Jatropha Genome Database

JcCA0269931.10 (JcS_101556.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0269931
Scaffold:
JcS_101556 JcCA0142031(-) =JcCB0162951(-) =JcCA0269931(-) =JcCB0698781(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl D7UC86_VITVI 291 91.8 97.3 (tr|D7UC86) Whole genome shotgun sequence of line PN40024, scaffold_46.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00026897001 PE=4 SV=1
Arabidopsis_pep AT4G20960.1 286 84.1 94.7 | Symbols: | cytidine/deoxycytidylate deaminase family protein | chr4:11212077-11213530 FORWARD
soybean_pep Glyma03g01270.1 272 78.2 89.1  
Medicago_pep IMGA|Medtr8g139330.1 265 79.0 89.5 Riboflavin biosynthesis protein RibD chr08_pseudomolecule_IMGAG_V3 33987054-33990936 E EGN_Mt090430 20090702
grape_pep GSVIVT01026897001 291 91.8 97.3  
castor_bean_cds --No_Hits--        
castor_bean_pep 30324.m000023 138 58.1 77.1 riboflavin-specific deaminase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0269931.10 length: 260 aa.
IPR002125 CMP/dCMP deaminase, zinc-binding
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0016787 hydrolase activity    
HMMPfam PF00383 dCMP_cyt_deam_1 2.3e-20 87-183
IPR004794 Riboflavin biosynthesis protein RibD
Molecular Function GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity    
Molecular Function GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity    
Biological Process GO:0009231 riboflavin biosynthetic process    
Biological Process GO:0055114 oxidation reduction    
HMMPanther PTHR11079:SF10 RIBOFLAVIN-SPECIFIC 2.4e-66 86-235
HMMTigr TIGR00326 eubact_ribD: 1.2e-21 90-258
IPR016192 APOBEC/CMP deaminase, zinc-binding
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0016787 hydrolase activity    
PatternScan PS00903 CYT_DCMP_DEAMINASES NA 133-171
IPR016193 Cytidine deaminase-like
Molecular Function GO:0003824 catalytic activity    
superfamily SSF53927 Cytidine 9.6e-41 83-235
no_ID  
Gene3D G3DSA:3.40.140.10 no description 4.8e-32 84-227
HMMPanther PTHR11079 CYTOSINE 2.4e-66 86-235