| JcS_100419 | JcCA0225811(+) =JcCA0264101(-) =JcCA0077451(+) =JcCA0136621(-) =JcCB0506361(+) =JcCA0266291(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | Q8H6Q8_PONTR | 322 | 82.6 | 91.0 | (tr|Q8H6Q8) CTV.20 OS=Poncirus trifoliata GN=CTV.20 PE=4 SV=1 |
| Arabidopsis_pep | --No_Hits-- | ||||
| soybean_pep | Glyma01g20680.1 | 151 | 40.8 | 60.3 | |
| Medicago_pep | IMGA|AC234026_1.1 | 131 | 43.1 | 62.1 | RNA-directed DNA polymerase (Reverse transcriptase) AC234026.1 2154-4412 H EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01018780001 | 62.0 | 34.2 | 63.3 | |
| castor_bean_cds | --No_Hits-- | ||||
| castor_bean_pep | --No_Hits-- | ||||
| JAT_13201ests | gi|268516665|gb|FM887144.1|FM887144 | 311 | 87.5 | 87.5 | FM887144 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000247, mRNA sequence |
| KJC_r1 | KJC_c01717 | 228 | 90.5 | 90.5 |
| JcCA0266291.10 | length: 346 aa. | |||
| IPR000477 | RNA-directed DNA polymerase (reverse transcriptase) | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003723 | RNA binding | ||
| Molecular Function | GO:0003964 | RNA-directed DNA polymerase activity | ||
| Biological Process | GO:0006278 | RNA-dependent DNA replication | ||
| HMMPfam | PF00078 | RVT_1 | 2.7e-24 | 193-336 |
| ProfileScan | PS50878 | RT_POL | 12.135 | 154-336 |
| no_ID | ||||
| Gene3D | G3DSA:3.30.70.270 | no description | 2e-20 | 189-337 |
| HMMPanther | PTHR10178 | GAG/POL/ENV | 1.6e-55 | 154-340 |
| HMMPanther | PTHR10178:SF14 | RETROVIRUS | 1.6e-55 | 154-340 |
| Seg | seg | seg | NA | 46-55 63-85 125-138 148-161 |
| superfamily | SSF56672 | DNA/RNA | 3.7e-61 | 162-340 |