Jatropha Genome Database

JcCA0265561.10 (JcS_100886.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0265561
Scaffold:
JcS_100886 JcCA0265561(-) =JcCA0296711(-) =JcCA0151401(+) =JcCA0285981(+) =JcCB0060901(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SHZ2_RICCO 216 77.3 90.6 (tr|B9SHZ2) WD-repeat protein, putative OS=Ricinus communis GN=RCOM_0611550 PE=4 SV=1
Arabidopsis_pep AT4G21520.1 158 68.9 80.6 | Symbols: | transducin family protein / WD-40 repeat family protein | chr4:11447514-11450377 REVERSE
soybean_pep Glyma07g30960.1 173 70.5 81.1  
Medicago_pep IMGA|Medtr4g125120.1 169 69.1 78.0 Cytochrome cd1-nitrite reductase-like, C-terminal haem d1, putative chr04_pseudomolecule_IMGAG_V3 29444563-29437786 E EGN_Mt090430 20090702
grape_pep GSVIVT01003194001 167 76.0 86.5  
castor_bean_cds 29681.m001313 250 83.2 83.2 WD-repeat protein, putative
castor_bean_pep 29681.m001313 216 77.3 90.6 WD-repeat protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0265561.10 length: 128 aa.
IPR011046 WD40 repeat-like-containing domain
method AccNumber shortName E-value location
superfamily SSF50978 WD40 1.3e-08 18-76
IPR019781 WD40 repeat, subgroup
HMMPfam PF00400 WD40 0.12 18-36
no_ID  
HMMPanther PTHR13211 UNCHARACTERIZED 1.8e-24 1-98