Jatropha Genome Database

JcCA0264441.10 (JcS_100001.130)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0264441
Scaffold:
JcS_100001 JcCB0130751(-) =JcCA0312871(-) =JcCB0287701(+) =JcCB0171671(-) =JcCA0315721(-) =JcCB0186361(+) =JcCA0066941(+) =JcCA0264441(-) =JcPR10F8MCI(+) =JcCA0277701(-) =JcCB0465311(+) =JcCC0332622(+) =JcCB0455701(-) =JcCB0698151(+) =JcCB0545461(+) =JcCA0316711(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9T4A2_RICCO 153 50.3 55.1 (tr|B9T4A2) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0176310 PE=4 SV=1
Arabidopsis_pep AT4G14240.1 100 40.6 48.3 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein-related (TAIR:AT4G14230.1); Has 6770 Blast hits to 6657 proteins in 1347 species: Archae - 62; Bacteria - 4461; Metazoa - 254; Fungi - 179; Plants - 121; Viruses - 0; Other Eukaryotes - 1693 (source: NCBI BLink). | chr4:8204712-8207273 REVERSE
soybean_pep Glyma07g38600.1 125 45.1 51.6  
Medicago_pep IMGA|Medtr7g010120.1 87.4 37.4 46.6 CBS chr07_pseudomolecule_IMGAG_V3 2120338-2124503 E EGN_Mt090430 20090702
grape_pep GSVIVT01011104001 147 46.2 54.3  
castor_bean_cds 28153.m000279 204 87.4 87.4 conserved hypothetical protein
castor_bean_pep 28153.m000279 153 50.3 55.1 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0264441.10 length: 202 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR12064 ANCIENT 1.5e-17 26-162
HMMPanther PTHR12064:SF2 UNCHARACTERIZED 1.5e-17 26-162
Seg seg seg NA 2-15
45-68
122-133
162-175