Jatropha Genome Database

JcCA0262351.10 (JcS_101696.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0262351
Scaffold:
JcS_101696 JcCA0262351(+) =JcCA0317081(+) =JcCB0010741(-) =JcCB0444751(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SFH6_RICCO 251 76.4 82.0 (tr|B9SFH6) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0646320 PE=4 SV=1
Arabidopsis_pep AT1G07130.1 174 53.8 67.5 | Symbols: STN1, ATSTN1 | STN1; nucleic acid binding | chr1:2187928-2188410 FORWARD
soybean_pep Glyma08g18770.1 170 53.5 67.5  
Medicago_pep IMGA|Medtr5g020310.1 182 55.8 71.8 nucleic acid binding, OB-fold, tRNA/helicase-type chr05_pseudomolecule_IMGAG_V3 7648206-7663816 E EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds 29703.m001484 242 84.6 84.6 conserved hypothetical protein
castor_bean_pep 29703.m001484 251 76.4 82.0 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0262351.10 length: 165 aa.
IPR004365 Nucleic acid binding, OB-fold, tRNA/helicase-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF01336 tRNA_anti 3.2e-11 46-136
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 2.3e-05 34-159
IPR016027 Nucleic acid-binding, OB-fold-like
superfamily SSF50249 Nucleic 1.2e-13 38-159
no_ID  
Seg seg seg NA 25-35