Jatropha Genome Database

JcCA0260771.10 (JcS_100341.100)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0260771
Scaffold:
JcS_100341 JcCB0696091(+) =JcCB0204821(-) =JcCA0317481(-) =JcCB0030711(+) =JcCA0260771(+) =JcCB0333061(+) =JcCB0707071(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SYY0_RICCO 505 86.3 96.0 (tr|B9SYY0) Trigger factor, putative OS=Ricinus communis GN=RCOM_0546740 PE=4 SV=1
Arabidopsis_pep AT5G55220.1 453 76.3 93.2 | Symbols: | trigger factor type chaperone family protein | chr5:22397677-22400678 FORWARD
soybean_pep Glyma14g02220.1 468 79.1 93.9  
Medicago_pep IMGA|Medtr5g101240.1 452 75.7 92.4 Bacterial trigger factor, C-terminal chr05_pseudomolecule_IMGAG_V3 40502851-40507905 E EGN_Mt090430 20090702
grape_pep GSVIVT01037722001 489 82.7 95.0  
castor_bean_cds 29640.m000411 771 87.0 87.0 Trigger factor, putative
castor_bean_pep 29640.m000411 505 86.3 96.0 Trigger factor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0260771.10 length: 277 aa.
IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type
method AccNumber shortName E-value location
Biological Process GO:0006457 protein folding    
HMMPfam PF00254 FKBP_C 5.5e-06 19-83
IPR008880 Trigger factor, C-terminal, bacterial
Biological Process GO:0006457 protein folding    
Biological Process GO:0015031 protein transport    
HMMPfam PF05698 Trigger_C 1.5e-22 109-268
superfamily SSF109998 TF 4.9e-19 95-272
no_ID  
Coil coil coiled-coil NA 107-128
227-248
Gene3D G3DSA:3.10.50.40 no description 3.5e-14 1-96
superfamily SSF54534 FKBP-like 2.6e-10 23-96