Jatropha Genome Database

JcCA0258831.20 (JcS_100141.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0258831
Scaffold:
JcS_100141 JcCB0190911(+) =JcCB0839271(+) =JcCA0258831(-) =JcCA0105841(-) =JcCA0308991(-) =JcCA0313811(+) =JcCB0289031(-) =JcCB0432051(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9GW73_POPTR 473 87.0 94.5 (tr|B9GW73) GRAS family transcription factor OS=Populus trichocarpa GN=GRAS19 PE=4 SV=1
Arabidopsis_pep AT1G63100.1 353 68.0 80.4 | Symbols: | scarecrow transcription factor family protein | chr1:23399391-23401367 REVERSE
soybean_pep Glyma05g03490.2 420 77.1 89.5  
Medicago_pep IMGA|Medtr7g148270.1 208 43.5 63.6 GRAS transcription factor chr07_pseudomolecule_IMGAG_V3 35104592-35102180 H EGN_Mt090430 20090702
grape_pep GSVIVT01019810001 248 83.8 91.5  
castor_bean_cds 30190.m011131 842 89.1 89.1 DELLA protein RGL1, putative
castor_bean_pep 30190.m011131 470 91.4 95.9 DELLA protein RGL1, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0258831.20 length: 254 aa.
IPR005202 Transcription factor GRAS
method AccNumber shortName E-value location
HMMPfam PF03514 GRAS 9.8e-82 2-238
ProfileScan PS50985 GRAS 35.727 1-216