Jatropha Genome Database

JcCA0257171.20 (JcS_101416.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0257171
Scaffold:
JcS_101416 JcCB0886671(+) =JcCB0224601(+) =JcCB0424221(-) =JcCB0084431(-) =JcCA0257171(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RMP5_RICCO 234 59.9 68.4 (tr|B9RMP5) Heat shock protein, putative OS=Ricinus communis GN=RCOM_1082490 PE=3 SV=1
Arabidopsis_pep AT4G27670.1 111 40.3 54.1 | Symbols: HSP21 | HSP21 (HEAT SHOCK PROTEIN 21) | chr4:13819048-13819895 REVERSE
soybean_pep Glyma11g37450.1 167 58.3 65.7  
Medicago_pep IMGA|Medtr3g103040.1 182 53.6 61.4 Heat shock protein Hsp20 chr03_pseudomolecule_IMGAG_V3 25274000-25272930 F EGN_Mt090430 20090702
grape_pep GSVIVT01010308001 210 61.3 67.5  
castor_bean_cds 29929.m004750 155 82.6 82.6 heat shock protein, putative
castor_bean_pep 29929.m004750 234 59.9 68.4 heat shock protein, putative
JAT_13201ests gi|268526346|gb|FM891602.1|FM891602 745 97.4 97.4 FM891602 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001924, mRNA sequence
KJC_r1 KJC_c07930 385 98.5 98.5  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0257171.20 length: 238 aa.
IPR002068 Heat shock protein Hsp20
method AccNumber shortName E-value location
HMMPfam PF00011 HSP20 2e-20 139-229
ProfileScan PS01031 HSP20 18.651 139-225
IPR008978 HSP20-like chaperone
superfamily SSF49764 HSP20-like 2.9e-24 86-238
no_ID  
Gene3D G3DSA:2.60.40.790 no description 2.7e-20 85-237
HMMPanther PTHR11527 SMALL 1.2e-37 82-238
HMMPanther PTHR11527:SF18 HEAT 1.2e-37 82-238
Seg seg seg NA 23-43
65-79
100-109