Jatropha Genome Database

JcCA0257171.10 (JcS_101416.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0257171
Scaffold:
JcS_101416 JcCB0886671(+) =JcCB0224601(+) =JcCB0424221(-) =JcCB0084431(-) =JcCA0257171(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SPJ1_RICCO 402 46.1 60.2 (tr|B9SPJ1) Disease resistance protein RPM1, putative OS=Ricinus communis GN=RCOM_0024480 PE=4 SV=1
Arabidopsis_pep AT3G07040.1 111 25.2 42.8 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE
soybean_pep Glyma01g01400.1 125 25.9 44.2  
Medicago_pep IMGA|Medtr5g028060.1 127 25.9 44.1 NB-ARC chr05_pseudomolecule_IMGAG_V3 11516153-11519924 E EGN_Mt090430 20090702
grape_pep GSVIVT01032422001 232 43.8 56.8  
castor_bean_cds 29758.m000655 56.0 88.1 88.1 conserved hypothetical protein
castor_bean_pep 27504.m000625 402 46.1 60.2 Disease resistance protein RPM1, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c05223 1162 97.9 97.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0257171.10 length: 518 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.80.10.10 no description 2.9e-10 161-312
322-493
HMMPanther PTHR23155 LEUCINE-RICH 1.1e-11 157-488
HMMPanther PTHR23155:SF37 LEUCINE-RICH 1.1e-11 157-488
Seg seg seg NA 222-235
298-310
superfamily SSF52058 L 7e-38 117-518