Jatropha Genome Database

JcCA0254771.10 (JcS_100114.80)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0254771
Scaffold:
JcS_100114 JcCA0107311(-) =JcCB0186601(+) =JcCB0249501(+) =JcCA0075421(+) =JcCB0173091(-) =JcCA0254771(-) =JcCB0082241(-) =JcCB0704851(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl C9E1T3_9ROSI 179 85.4 86.4 (tr|C9E1T3) Gast1-like protein OS=Jatropha curcas PE=4 SV=1
Arabidopsis_pep AT1G75750.1 109 67.9 76.5 | Symbols: GASA1 | GASA1 (GAST1 PROTEIN HOMOLOG 1) | chr1:28441813-28442284 REVERSE
soybean_pep Glyma17g37760.1 113 65.5 73.8  
Medicago_pep IMGA|Medtr3g156410.1 109 62.4 72.9 Gibberellin regulated protein chr03_pseudomolecule_IMGAG_V3 41000504-40999174 E EGN_Mt090430 20090702
grape_pep GSVIVT01009902001 111 72.9 84.3  
castor_bean_cds 30170.m014182 147 88.0 88.0 conserved hypothetical protein
castor_bean_pep 30170.m014181 109 63.1 75.0 Gibberellin-regulated protein 1 precursor, putative
JAT_13201ests gi|254029187|gb|GR716936.1|GR716936 507 100.0 100.0 JcrRL_ASE0005 Salinity tolerance responsive genes from Jatropha curcas root cDNA Jatropha curcas cDNA, mRNA sequence
KJC_r1 KJC_c06717 484 99.2 99.2  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0254771.10 length: 103 aa.
IPR003854 Gibberellin regulated protein
method AccNumber shortName E-value location
HMMPfam PF02704 GASA 1.2e-32 7-103
no_ID  
Seg seg seg NA 6-19