Jatropha Genome Database

JcCA0254141.20 (JcS_101772.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0254141
Scaffold:
JcS_101772 JcCA0301151(+) =JcCB0429541(+) =JcCB0088661(+) =JcCA0254141(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RXK8_RICCO 563 79.5 82.7 (tr|B9RXK8) ATP synthase gamma chain OS=Ricinus communis GN=RCOM_0904560 PE=3 SV=1
Arabidopsis_pep AT4G04640.1 502 73.4 78.8 | Symbols: ATPC1 | ATPC1; enzyme regulator | chr4:2350761-2351882 REVERSE
soybean_pep Glyma15g11490.2 551 79.3 82.1  
Medicago_pep IMGA|Medtr3g068860.1 393 63.5 76.1 H+-transporting two-sector ATPase, gamma subunit chr03_pseudomolecule_IMGAG_V3 16339817-16340876 E EGN_Mt090430 20090702
grape_pep GSVIVT01012724001 237 71.0 73.8  
castor_bean_cds 29842.m003589 1122 88.8 88.8 ATP synthase gamma chain 2, chloroplast, putative
castor_bean_pep 29842.m003589 563 79.5 82.7 ATP synthase gamma chain 2, chloroplast, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c01722 1483 99.9 99.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0254141.20 length: 352 aa.
IPR000131 ATPase, F1 complex, gamma subunit
method AccNumber shortName E-value location
Biological Process GO:0015986 ATP synthesis coupled proton transport    
Cellular Component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)    
Molecular Function GO:0046933 hydrogen ion transporting ATP synthase activity, rotational mechanism    
Molecular Function GO:0046961 proton-transporting ATPase activity, rotational mechanism    
FPrintScan PR00126 ATPASEGAMMA 1.1e-26 127-146
220-237
322-341
HMMPanther PTHR11693 ATP 5.8e-157 45-350
HMMPfam PF00231 ATP-synt 8.8e-83 56-351
HMMTigr TIGR01146 ATPsyn_F1gamma: 1.3e-136 53-352
superfamily SSF52943 ATP 7e-66 54-352
no_ID  
Gene3D G3DSA:3.40.1380.10 no description 4.4e-54 79-334
HAMAP MF_00815 ATPG_MF_00815 24.318 53-352
HMMPanther PTHR11693:SF9 ATP 5.8e-157 45-350
Seg seg seg NA 11-21
35-49
148-159
317-330