Jatropha Genome Database

JcCA0254131.20 (JcS_100275.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0254131
Scaffold:
JcS_100275 JcCB0163891(-) =JcCA0289691(+) =JcCA0254131(-) =JcCB0372411(-) =JcCB0588301(-) =JcCB0224421(+) =JcCB0695521(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RZ79_RICCO 564 67.9 77.0 (tr|B9RZ79) DNA mismatch repair protein muts2, putative OS=Ricinus communis GN=RCOM_0936040 PE=3 SV=1
Arabidopsis_pep AT1G65070.1 351 49.2 67.9 | Symbols: | DNA mismatch repair MutS family protein | chr1:24173132-24176244 REVERSE
soybean_pep Glyma07g31550.1 431 55.3 71.3  
Medicago_pep IMGA|AC233659_24.1 324 57.5 77.1 MutS 2 protein AC233659.1 104034-100163 E EGN_Mt090430 20090702
grape_pep GSVIVT01038675001 86.7 26.6 43.7  
castor_bean_cds 29851.m002400 739 84.3 84.3 DNA mismatch repair protein muts2, putative
castor_bean_pep 29851.m002400 564 67.9 77.0 DNA mismatch repair protein muts2, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c02900 490 98.2 98.2  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0254131.20 length: 424 aa.
IPR007696 DNA mismatch repair protein MutS, core
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006298 mismatch repair    
Molecular Function GO:0030983 mismatched DNA binding    
HMMSmart SM00533 no description 6.9e-05 51-373
superfamily SSF48334 DNA 2.7e-11 108-335
no_ID  
Coil coil coiled-coil NA 191-212
Seg seg seg NA 132-149