Jatropha Genome Database

JcCA0250521.10 (JcS_100164.90)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0250521
Scaffold:
JcS_100164 JcCB0456151(+) =JcCB0297821(-) =JcCB0477181(+) =JcCA0134311(+) =JcCB0120841(-) =JcCB0029801(-) =JcCB0242921(-) =JcCA0250521(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RMJ8_RICCO 246 98.3 99.2 (tr|B9RMJ8) Plant mitotic spindle assembly checkpoint protein mad2, putative OS=Ricinus communis GN=RCOM_1081200 PE=4 SV=1
Arabidopsis_pep AT3G25980.1 231 90.8 95.0 | Symbols: | mitotic spindle checkpoint protein, putative (MAD2) | chr3:9503232-9504402 FORWARD
soybean_pep Glyma18g01350.1 241 96.6 98.3  
Medicago_pep IMGA|Medtr3g103180.1 229 92.4 94.1 DNA-binding HORMA chr03_pseudomolecule_IMGAG_V3 25336861-25335015 F EGN_Mt090430 20090702
grape_pep GSVIVT01010325001 236 94.9 95.8  
castor_bean_cds 29929.m004703 476 91.7 91.7 plant mitotic spindle assembly checkpoint protein mad2, putative
castor_bean_pep 29929.m004703 246 98.3 99.2 plant mitotic spindle assembly checkpoint protein mad2, putative
JAT_13201ests gi|262090863|gb|GT229221.1|GT229221 180 98.1 98.1 JC786 Jatropha seeds from fruits at three stages of maturation Jatropha curcas cDNA clone PL19SE.H09.scf 5', mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0250521.10 length: 119 aa.
IPR003511 DNA-binding HORMA
method AccNumber shortName E-value location
Biological Process GO:0007067 mitosis    
HMMPfam PF02301 HORMA 7.3e-22 5-103
ProfileScan PS50815 HORMA 22.090 1-109
superfamily SSF56019 The 4.3e-30 1-117
no_ID  
Gene3D G3DSA:3.30.900.10 no description 1.3e-33 1-117
HMMPanther PTHR11842 MITOTIC 1.9e-65 1-117
HMMPanther PTHR11842:SF11 MITOTIC 1.9e-65 1-117